Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.19□□□□□ -0.14
SCN2BO60939 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.19□□□□□ -0.14
SCN2BO60939 ST20-AS1-201ENST00000560255 4223 ntBASIC14.19□□□□□ -0.14
SCN2BO60939 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SCN2BO60939 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCN2BO60939 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SCN2BO60939 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 CICP4-201ENST00000447359 2812 ntBASIC14.18□□□□□ -0.14
SCN2BO60939 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SCN2BO60939 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 C1QBPP1-201ENST00000400117 770 ntBASIC14.18□□□□□ -0.14
SCN2BO60939 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SCN2BO60939 AC098850.1-201ENST00000419919 790 ntBASIC14.18□□□□□ -0.14
SCN2BO60939 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.18□□□□□ -0.14
SCN2BO60939 SPTLC1P1-201ENST00000447199 261 ntBASIC14.18□□□□□ -0.14
SCN2BO60939 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 AC055876.2-201ENST00000531834 546 ntBASIC14.18□□□□□ -0.14
SCN2BO60939 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.18□□□□□ -0.14
SCN2BO60939 AL359711.2-201ENST00000563105 872 ntBASIC14.18□□□□□ -0.14
SCN2BO60939 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.18□□□□□ -0.14
SCN2BO60939 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SCN2BO60939 AL603764.1-201ENST00000636452 321 ntBASIC14.18□□□□□ -0.14
SCN2BO60939 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SCN2BO60939 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SCN2BO60939 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SCN2BO60939 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN2BO60939 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SCN2BO60939 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SCN2BO60939 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.17□□□□□ -0.14
SCN2BO60939 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SCN2BO60939 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SCN2BO60939 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SCN2BO60939 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms