Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
OPHN1O60890 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.68■□□□□ 0.1
OPHN1O60890 BCRP2-202ENST00000447763 634 ntBASIC15.68■□□□□ 0.1
OPHN1O60890 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.68■□□□□ 0.1
OPHN1O60890 BCRP6-201ENST00000510112 632 ntBASIC15.68■□□□□ 0.1
OPHN1O60890 BCRP7-201ENST00000511549 544 ntBASIC15.68■□□□□ 0.1
OPHN1O60890 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 PTP4A1P2-201ENST00000546033 454 ntBASIC15.68■□□□□ 0.1
OPHN1O60890 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.68■□□□□ 0.1
OPHN1O60890 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
OPHN1O60890 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
OPHN1O60890 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.68■□□□□ 0.1
OPHN1O60890 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
OPHN1O60890 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
OPHN1O60890 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.67■□□□□ 0.1
OPHN1O60890 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.67■□□□□ 0.1
OPHN1O60890 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
OPHN1O60890 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
OPHN1O60890 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.67■□□□□ 0.1
OPHN1O60890 AC099548.2-209ENST00000480264 625 ntBASIC15.67■□□□□ 0.1
OPHN1O60890 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
OPHN1O60890 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.67■□□□□ 0.1
OPHN1O60890 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.67■□□□□ 0.1
OPHN1O60890 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.67■□□□□ 0.1
OPHN1O60890 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
OPHN1O60890 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.67■□□□□ 0.1
OPHN1O60890 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.67■□□□□ 0.1
OPHN1O60890 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
OPHN1O60890 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
OPHN1O60890 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.66■□□□□ 0.1
OPHN1O60890 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
OPHN1O60890 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms