Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 STRCP1-201ENST00000509801 5328 ntBASIC11.27□□□□□ -0.6
SNAI2O43623 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.27□□□□□ -0.6
SNAI2O43623 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SNAI2O43623 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SNAI2O43623 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.27□□□□□ -0.61
SNAI2O43623 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.27□□□□□ -0.61
SNAI2O43623 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SNAI2O43623 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SNAI2O43623 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SNAI2O43623 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SNAI2O43623 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 AL133267.1-201ENST00000398220 340 ntBASIC11.27□□□□□ -0.61
SNAI2O43623 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
SNAI2O43623 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
SNAI2O43623 AL353705.2-201ENST00000428243 662 ntBASIC11.27□□□□□ -0.61
SNAI2O43623 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.27□□□□□ -0.61
SNAI2O43623 AC079140.1-201ENST00000508039 487 ntBASIC11.27□□□□□ -0.61
SNAI2O43623 RNA5SP416-201ENST00000516838 111 ntBASIC11.27□□□□□ -0.61
SNAI2O43623 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
SNAI2O43623 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
SNAI2O43623 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
SNAI2O43623 AC092902.6-201ENST00000641783 218 ntBASIC11.27□□□□□ -0.61
SNAI2O43623 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.27□□□□□ -0.61
SNAI2O43623 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
SNAI2O43623 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 HLA-A-201ENST00000376802 1334 ntBASIC11.27□□□□□ -0.61
SNAI2O43623 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.27□□□□□ -0.61
SNAI2O43623 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNAI2O43623 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.26□□□□□ -0.61
SNAI2O43623 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.26□□□□□ -0.61
SNAI2O43623 AC152010.1-201ENST00000415779 2006 ntBASIC11.26□□□□□ -0.61
SNAI2O43623 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.26□□□□□ -0.61
SNAI2O43623 AP001267.2-201ENST00000532619 2086 ntBASIC11.26□□□□□ -0.61
SNAI2O43623 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.26□□□□□ -0.61
SNAI2O43623 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.26□□□□□ -0.61
SNAI2O43623 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.26□□□□□ -0.61
SNAI2O43623 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.26□□□□□ -0.61
SNAI2O43623 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SNAI2O43623 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SNAI2O43623 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.26□□□□□ -0.61
SNAI2O43623 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.26□□□□□ -0.61
SNAI2O43623 FAM58CP-201ENST00000435741 640 ntBASIC11.26□□□□□ -0.61
SNAI2O43623 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.26□□□□□ -0.61
SNAI2O43623 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SNAI2O43623 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.26□□□□□ -0.61
SNAI2O43623 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms