Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
NDUFA1O15239 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
NDUFA1O15239 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.28□□□□□ -0.76
NDUFA1O15239 MIR574-201ENST00000385209 96 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.28□□□□□ -0.76
NDUFA1O15239 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 FABP5-202ENST00000396359 986 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 SLED1-202ENST00000512051 380 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.28□□□□□ -0.76
NDUFA1O15239 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.28□□□□□ -0.76
NDUFA1O15239 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.28□□□□□ -0.76
NDUFA1O15239 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
NDUFA1O15239 RN7SL828P-201ENST00000607615 303 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 MIR6080-201ENST00000617359 66 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 AL513210.1-201ENST00000629608 234 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 COL6A4P2-202ENST00000504443 2753 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 AL354702.1-201ENST00000442006 1960 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
NDUFA1O15239 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.27□□□□□ -0.76
NDUFA1O15239 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
NDUFA1O15239 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.76
NDUFA1O15239 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
NDUFA1O15239 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.27□□□□□ -0.76
NDUFA1O15239 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
NDUFA1O15239 AC015909.5-201ENST00000624336 2266 ntBASIC10.27□□□□□ -0.76
NDUFA1O15239 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
NDUFA1O15239 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
NDUFA1O15239 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.27□□□□□ -0.77
NDUFA1O15239 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
NDUFA1O15239 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.27□□□□□ -0.77
NDUFA1O15239 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.27□□□□□ -0.77
NDUFA1O15239 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms