Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 AC130686.1-201ENST00000622936 2466 ntBASIC14.16□□□□□ -0.14
UPK1AO00322 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 PCDHA3-202ENST00000532566 4594 ntBASIC14.16□□□□□ -0.14
UPK1AO00322 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 ACKR1-201ENST00000368121 1240 ntBASIC14.16□□□□□ -0.14
UPK1AO00322 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 AL162726.2-201ENST00000438986 1017 ntBASIC14.16□□□□□ -0.14
UPK1AO00322 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.16□□□□□ -0.14
UPK1AO00322 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.16□□□□□ -0.14
UPK1AO00322 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.16□□□□□ -0.14
UPK1AO00322 AC092364.2-202ENST00000597012 1073 ntBASIC14.16□□□□□ -0.14
UPK1AO00322 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.16□□□□□ -0.14
UPK1AO00322 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
UPK1AO00322 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.16□□□□□ -0.14
UPK1AO00322 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.16□□□□□ -0.14
UPK1AO00322 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UPK1AO00322 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UPK1AO00322 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.15□□□□□ -0.14
UPK1AO00322 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UPK1AO00322 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1AO00322 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1AO00322 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UPK1AO00322 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1AO00322 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.15□□□□□ -0.14
UPK1AO00322 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1AO00322 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1AO00322 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.15□□□□□ -0.14
UPK1AO00322 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.15□□□□□ -0.14
UPK1AO00322 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.15□□□□□ -0.14
UPK1AO00322 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.15□□□□□ -0.14
UPK1AO00322 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 AC022447.6-201ENST00000515522 438 ntBASIC14.15□□□□□ -0.14
UPK1AO00322 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1AO00322 AP001063.1-201ENST00000568332 529 ntBASIC14.15□□□□□ -0.14
UPK1AO00322 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UPK1AO00322 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1AO00322 AL033527.5-201ENST00000641382 801 ntBASIC14.15□□□□□ -0.14
UPK1AO00322 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
UPK1AO00322 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 FLJ16779-201ENST00000612722 7638 ntBASIC14.15□□□□□ -0.14
UPK1AO00322 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 AC027612.1-201ENST00000445234 2395 ntBASIC14.15□□□□□ -0.14
UPK1AO00322 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1AO00322 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
UPK1AO00322 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
UPK1AO00322 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
UPK1AO00322 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1AO00322 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1AO00322 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms