Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 AP001267.2-201ENST00000532619 2086 ntBASIC15.12■□□□□ 0.01
AP3B1O00203 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.12■□□□□ 0.01
AP3B1O00203 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
AP3B1O00203 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
AP3B1O00203 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
AP3B1O00203 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3B1O00203 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3B1O00203 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
AP3B1O00203 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
AP3B1O00203 AC027796.2-201ENST00000575326 344 ntBASIC15.12■□□□□ 0.01
AP3B1O00203 CLUHP6-201ENST00000580789 941 ntBASIC15.12■□□□□ 0.01
AP3B1O00203 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
AP3B1O00203 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.12■□□□□ 0.01
AP3B1O00203 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP3B1O00203 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3B1O00203 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AP3B1O00203 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 MRPL37P1-201ENST00000592451 1337 ntBASIC15.12■□□□□ 0.01
AP3B1O00203 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP3B1O00203 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
AP3B1O00203 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AP3B1O00203 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
AP3B1O00203 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AP3B1O00203 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3B1O00203 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3B1O00203 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3B1O00203 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 AC131206.1-201ENST00000538078 1211 ntBASIC15.11■□□□□ 0.01
AP3B1O00203 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3B1O00203 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3B1O00203 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3B1O00203 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AP3B1O00203 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 AL138725.1-201ENST00000407347 1314 ntBASIC15.11■□□□□ 0.01
AP3B1O00203 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
AP3B1O00203 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3B1O00203 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3B1O00203 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AP3B1O00203 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
AP3B1O00203 AL136172.1-201ENST00000598590 1394 ntBASIC15.11■□□□□ 0.01
AP3B1O00203 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3B1O00203 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3B1O00203 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3B1O00203 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms