Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA2E9PIF3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.65□□□□□ -0.23
NPIPA2E9PIF3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
NPIPA2E9PIF3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AP000845.1-201ENST00000581677 2131 ntBASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AL591846.1-201ENST00000451736 433 ntBASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 KRT8P13-201ENST00000463294 1010 ntBASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 OR10B1P-201ENST00000601666 907 ntBASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AC005695.3-201ENST00000614522 232 ntBASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA2E9PIF3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 AL359258.3-201ENST00000622910 2331 ntBASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA2E9PIF3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms