Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
C1QTNF9BB2RNN3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC108734.2-201ENST00000420887 1069 ntBASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AL929302.1-201ENST00000426556 871 ntBASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 VENTXP4-201ENST00000449029 958 ntBASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC006529.1-201ENST00000459978 637 ntBASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC226150.1-201ENST00000544259 466 ntBASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC068867.1-201ENST00000559855 150 ntBASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC068418.2-201ENST00000577309 3703 ntBASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C1QTNF9BB2RNN3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 DUX4L50-201ENST00000455245 715 ntBASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C1QTNF9BB2RNN3 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms