Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 Z83851.2-201ENST00000609564 659 ntBASIC14.18□□□□□ -0.14
AP4S1Q9Y587 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 AL157414.3-201ENST00000624276 1954 ntBASIC14.18□□□□□ -0.14
AP4S1Q9Y587 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP4S1Q9Y587 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 KRT18P64-201ENST00000434946 1219 ntBASIC14.17□□□□□ -0.14
AP4S1Q9Y587 SPCS2P4-201ENST00000436160 681 ntBASIC14.17□□□□□ -0.14
AP4S1Q9Y587 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
AP4S1Q9Y587 RN7SL832P-201ENST00000607781 1756 ntBASIC14.17□□□□□ -0.14
AP4S1Q9Y587 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC118758.2-201ENST00000614242 2813 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AL353705.2-201ENST00000428243 662 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 FAM210CP-201ENST00000445714 574 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC093909.1-201ENST00000504731 1122 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 KRT18P35-201ENST00000510488 1269 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms