Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 AC091812.2-201ENST00000619081 385 ntBASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 AL691432.3-201ENST00000621860 400 ntBASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RCL1Q9Y2P8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 AC007967.2-201ENST00000432613 625 ntBASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 KRT18P64-201ENST00000434946 1219 ntBASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 KRT8P23-201ENST00000560090 1207 ntBASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 SAMD11P1-201ENST00000571429 661 ntBASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 AC023794.5-201ENST00000564380 2157 ntBASIC12.28□□□□□ -0.44
RCL1Q9Y2P8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 TCAM1P-207ENST00000485295 1537 ntBASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 UXT-AS1-201ENST00000590504 1525 ntBASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RCL1Q9Y2P8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms