Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AL645937.2-201ENST00000396808 931 ntBASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AC015911.4-201ENST00000588022 1070 ntBASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 TEX28P1-201ENST00000613479 1221 ntBASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 TEX28P2-201ENST00000617764 1221 ntBASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXJ3Q9UPW0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 DGCR9-201ENST00000609630 2415 ntBASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 KLF2P3-201ENST00000451977 1087 ntBASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 INGX-202ENST00000489074 768 ntBASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 GAPDHP40-201ENST00000505218 1006 ntBASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 IGHV3-42-201ENST00000520410 361 ntBASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 AL109936.8-201ENST00000641772 604 ntBASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXJ3Q9UPW0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms