Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.45■□□□□ 0.06
PCDH9Q9HC56 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 AL139094.1-201ENST00000405549 1188 ntBASIC15.45■□□□□ 0.06
PCDH9Q9HC56 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 AC011495.1-201ENST00000498085 584 ntBASIC15.45■□□□□ 0.06
PCDH9Q9HC56 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDH9Q9HC56 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 CLUHP6-201ENST00000580789 941 ntBASIC15.44■□□□□ 0.06
PCDH9Q9HC56 AC105233.6-201ENST00000642093 218 ntBASIC15.44■□□□□ 0.06
PCDH9Q9HC56 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDH9Q9HC56 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDH9Q9HC56 CICP4-201ENST00000447359 2812 ntBASIC15.43■□□□□ 0.06
PCDH9Q9HC56 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms