Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.42□□□□□ -0.1
LRTM1Q9HBL6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AL928921.2-201ENST00000641325 2442 ntBASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AC026434.2-201ENST00000506094 1078 ntBASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 SPCS2P1-201ENST00000561636 679 ntBASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AC124283.3-201ENST00000570869 594 ntBASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AC093726.1-201ENST00000608064 963 ntBASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.41□□□□□ -0.1
LRTM1Q9HBL6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 KLF2P2-201ENST00000416807 1039 ntBASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 SOCS2P1-201ENST00000417727 557 ntBASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AL359711.2-201ENST00000563105 872 ntBASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AC008761.3-201ENST00000624803 892 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms