Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX18Q96RF0 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX18Q96RF0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.71□□□□□ -0.21
SNX18Q96RF0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AC005034.1-201ENST00000426657 489 ntBASIC13.71□□□□□ -0.21
SNX18Q96RF0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AC004890.2-204ENST00000481968 304 ntBASIC13.71□□□□□ -0.21
SNX18Q96RF0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 TIMM17BP1-201ENST00000545713 516 ntBASIC13.71□□□□□ -0.21
SNX18Q96RF0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AL590560.3-201ENST00000623350 461 ntBASIC13.71□□□□□ -0.21
SNX18Q96RF0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX18Q96RF0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
SNX18Q96RF0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.71□□□□□ -0.22
SNX18Q96RF0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SNX18Q96RF0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
SNX18Q96RF0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.71□□□□□ -0.22
SNX18Q96RF0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms