Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NSMCE2Q96MF7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 AC105206.1-202ENST00000314927 2368 ntBASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 TPM4P1-201ENST00000436100 807 ntBASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 KRT126P-201ENST00000549467 1181 ntBASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 BX640515.1-201ENST00000617215 977 ntBASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 AC012617.1-204ENST00000586340 2305 ntBASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NSMCE2Q96MF7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 GPS2P2-201ENST00000430745 888 ntBASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 MIR4453-201ENST00000584019 89 ntBASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms