Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 GAPDHP40-201ENST00000505218 1006 ntBASIC14.43□□□□□ -0.1
VPS33AQ96AX1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 TIMM17BP1-201ENST00000545713 516 ntBASIC14.43□□□□□ -0.1
VPS33AQ96AX1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 Z92544.3-201ENST00000624747 417 ntBASIC14.43□□□□□ -0.1
VPS33AQ96AX1 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 AC089987.1-201ENST00000551654 2209 ntBASIC14.43□□□□□ -0.1
VPS33AQ96AX1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.43□□□□□ -0.1
VPS33AQ96AX1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AL158070.2-201ENST00000623713 1621 ntBASIC14.42□□□□□ -0.1
VPS33AQ96AX1 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 HLA-J-203ENST00000494367 1087 ntBASIC14.42□□□□□ -0.1
VPS33AQ96AX1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AC027369.6-201ENST00000525520 931 ntBASIC14.42□□□□□ -0.1
VPS33AQ96AX1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AL158212.4-201ENST00000624062 1286 ntBASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AC134684.3-201ENST00000641758 218 ntBASIC14.42□□□□□ -0.1
VPS33AQ96AX1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VPS33AQ96AX1 AGGF1P1-201ENST00000509500 2073 ntBASIC14.42□□□□□ -0.1
VPS33AQ96AX1 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
VPS33AQ96AX1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VPS33AQ96AX1 MBLAC2-202ENST00000514906 1936 ntBASIC14.41□□□□□ -0.1
VPS33AQ96AX1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms