Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.67□□□□□ -0.38
RTN4IP1Q8WWV3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AC011474.4-201ENST00000623523 2076 ntBASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 MST1P2-201ENST00000457982 2291 ntBASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 TPT1P11-201ENST00000458482 498 ntBASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AC092337.1-201ENST00000568699 1129 ntBASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.66□□□□□ -0.38
RTN4IP1Q8WWV3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 AL137784.3-201ENST00000623858 2288 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 RNA5SP421-201ENST00000516864 134 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 AC135586.1-201ENST00000539323 574 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 AC025181.2-201ENST00000606994 802 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 AC008738.7-201ENST00000609744 511 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 AL121723.1-201ENST00000445194 1519 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms