Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AC018665.1-201ENST00000622927 1362 ntBASIC15.27■□□□□ 0.04
PTCD2Q8WV60 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AL139094.1-201ENST00000405549 1188 ntBASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AC006455.6-201ENST00000426192 893 ntBASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AC119751.2-201ENST00000504529 210 ntBASIC15.27■□□□□ 0.04
PTCD2Q8WV60 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 RAB43P1-201ENST00000561790 589 ntBASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 BTNL10-201ENST00000595971 695 ntBASIC15.27■□□□□ 0.04
PTCD2Q8WV60 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.27■□□□□ 0.04
PTCD2Q8WV60 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 MYO15B-237ENST00000642007 4893 ntBASIC15.27■□□□□ 0.03
PTCD2Q8WV60 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 AC018529.2-202ENST00000611482 3087 ntBASIC15.27■□□□□ 0.03
PTCD2Q8WV60 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 AL137783.1-201ENST00000623494 1896 ntBASIC15.27■□□□□ 0.03
PTCD2Q8WV60 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTCD2Q8WV60 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 KRT8P14-201ENST00000414254 1442 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 MIR1909-201ENST00000411312 80 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 BCRP2-202ENST00000447763 634 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AC082651.2-201ENST00000496833 166 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 MTND3P3-201ENST00000505004 126 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms