Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM78BQ5VT40 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 AL353705.2-201ENST00000428243 662 ntBASIC11.96□□□□□ -0.49
FAM78BQ5VT40 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 AC069335.1-201ENST00000489972 472 ntBASIC11.96□□□□□ -0.49
FAM78BQ5VT40 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 AC015910.1-201ENST00000579400 975 ntBASIC11.96□□□□□ -0.49
FAM78BQ5VT40 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 AC105339.1-204ENST00000636249 355 ntBASIC11.96□□□□□ -0.49
FAM78BQ5VT40 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.96□□□□□ -0.49
FAM78BQ5VT40 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
FAM78BQ5VT40 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 AC118758.2-201ENST00000614242 2813 ntBASIC11.95□□□□□ -0.5
FAM78BQ5VT40 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.95□□□□□ -0.5
FAM78BQ5VT40 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms