Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AC007292.2-201ENST00000593524 1812 ntBASIC13.07□□□□□ -0.32
FREM1Q5H8C1 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AL022328.3-201ENST00000607943 679 ntBASIC13.07□□□□□ -0.32
FREM1Q5H8C1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 CHMP1AP1-201ENST00000445563 662 ntBASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AC004898.1-201ENST00000451057 766 ntBASIC13.07□□□□□ -0.32
FREM1Q5H8C1 RNMTL1P1-201ENST00000454103 560 ntBASIC13.07□□□□□ -0.32
FREM1Q5H8C1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 AC104982.3-201ENST00000581995 514 ntBASIC13.07□□□□□ -0.32
FREM1Q5H8C1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
FREM1Q5H8C1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 AC244157.2-201ENST00000616239 1006 ntBASIC13.06□□□□□ -0.32
FREM1Q5H8C1 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.06□□□□□ -0.32
FREM1Q5H8C1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
FREM1Q5H8C1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 KRT8P13-201ENST00000463294 1010 ntBASIC13.05□□□□□ -0.32
FREM1Q5H8C1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 AC131206.1-201ENST00000538078 1211 ntBASIC13.05□□□□□ -0.32
FREM1Q5H8C1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM1Q5H8C1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms