Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 AC004241.5-201ENST00000623870 2448 ntBASIC12.66□□□□□ -0.38
SSBP1Q04837 KRT8P14-201ENST00000414254 1442 ntBASIC12.66□□□□□ -0.38
SSBP1Q04837 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 AC104109.2-201ENST00000602919 1418 ntBASIC12.66□□□□□ -0.38
SSBP1Q04837 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SSBP1Q04837 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 AL592309.1-201ENST00000443127 649 ntBASIC12.66□□□□□ -0.38
SSBP1Q04837 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.66□□□□□ -0.38
SSBP1Q04837 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 AF228730.6-201ENST00000641497 218 ntBASIC12.66□□□□□ -0.38
SSBP1Q04837 AC084121.3-201ENST00000641716 218 ntBASIC12.66□□□□□ -0.38
SSBP1Q04837 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP1Q04837 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP1Q04837 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP1Q04837 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SSBP1Q04837 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SSBP1Q04837 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SSBP1Q04837 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.65□□□□□ -0.38
SSBP1Q04837 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.65□□□□□ -0.38
SSBP1Q04837 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 RNA5SP416-201ENST00000516838 111 ntBASIC12.65□□□□□ -0.38
SSBP1Q04837 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.65□□□□□ -0.38
SSBP1Q04837 AL662844.1-201ENST00000546340 181 ntBASIC12.65□□□□□ -0.38
SSBP1Q04837 AL079307.3-201ENST00000556114 283 ntBASIC12.65□□□□□ -0.38
SSBP1Q04837 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.65□□□□□ -0.38
SSBP1Q04837 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 AC092865.6-201ENST00000642101 219 ntBASIC12.65□□□□□ -0.38
SSBP1Q04837 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.65□□□□□ -0.38
SSBP1Q04837 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms