Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
HOXC5Q00444 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HOXC5Q00444 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 AC018665.1-201ENST00000622927 1362 ntBASIC13.89□□□□□ -0.19
HOXC5Q00444 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HOXC5Q00444 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 AC134915.1-201ENST00000426461 574 ntBASIC13.89□□□□□ -0.19
HOXC5Q00444 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC5Q00444 SPTLC1P1-201ENST00000447199 261 ntBASIC13.89□□□□□ -0.19
HOXC5Q00444 RNA5SP421-201ENST00000516864 134 ntBASIC13.89□□□□□ -0.19
HOXC5Q00444 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC5Q00444 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 AL359711.2-201ENST00000563105 872 ntBASIC13.89□□□□□ -0.19
HOXC5Q00444 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC5Q00444 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.89□□□□□ -0.19
HOXC5Q00444 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.89□□□□□ -0.19
HOXC5Q00444 BX539320.1-201ENST00000623759 877 ntBASIC13.89□□□□□ -0.19
HOXC5Q00444 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.89□□□□□ -0.19
HOXC5Q00444 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HOXC5Q00444 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC5Q00444 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 KRT8P14-201ENST00000414254 1442 ntBASIC13.89□□□□□ -0.19
HOXC5Q00444 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC5Q00444 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.89□□□□□ -0.19
HOXC5Q00444 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HOXC5Q00444 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 CICP8-201ENST00000455800 2813 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 C1QBPP1-201ENST00000400117 770 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 MEP1AP4-201ENST00000423244 1087 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 RPL13AP25-201ENST00000484130 612 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 AC093004.1-201ENST00000508850 424 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 AC104596.2-201ENST00000512793 793 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 AC055876.2-201ENST00000531834 546 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.88□□□□□ -0.19
HOXC5Q00444 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 AC027796.2-201ENST00000575326 344 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 CHCHD2P3-201ENST00000603038 451 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 AC093813.1-201ENST00000605066 256 ntBASIC13.88□□□□□ -0.19
HOXC5Q00444 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.88□□□□□ -0.19
HOXC5Q00444 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
HOXC5Q00444 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
HOXC5Q00444 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HOXC5Q00444 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms