Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC003101.2-201ENST00000612557 442 ntBASIC10.63□□□□□ -0.71
RPL39P62891 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
RPL39P62891 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.63□□□□□ -0.71
RPL39P62891 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.63□□□□□ -0.71
RPL39P62891 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.63□□□□□ -0.71
RPL39P62891 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
RPL39P62891 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 KRT8P24-201ENST00000560290 1559 ntBASIC10.63□□□□□ -0.71
RPL39P62891 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 INE2-201ENST00000630399 1874 ntBASIC10.63□□□□□ -0.71
RPL39P62891 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
RPL39P62891 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 KRT8P12-202ENST00000472924 1397 ntBASIC10.63□□□□□ -0.71
RPL39P62891 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
RPL39P62891 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
RPL39P62891 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.63□□□□□ -0.71
RPL39P62891 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
RPL39P62891 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
RPL39P62891 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 Z82170.1-201ENST00000625081 3192 ntBASIC10.62□□□□□ -0.71
RPL39P62891 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 MTND6P24-201ENST00000440466 518 ntBASIC10.62□□□□□ -0.71
RPL39P62891 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.62□□□□□ -0.71
RPL39P62891 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.62□□□□□ -0.71
RPL39P62891 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.62□□□□□ -0.71
RPL39P62891 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.62□□□□□ -0.71
RPL39P62891 SAMD11P1-201ENST00000571429 661 ntBASIC10.62□□□□□ -0.71
RPL39P62891 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 AC018529.1-201ENST00000613063 361 ntBASIC10.62□□□□□ -0.71
RPL39P62891 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 AF228730.6-201ENST00000641497 218 ntBASIC10.62□□□□□ -0.71
RPL39P62891 AC084121.4-201ENST00000641598 221 ntBASIC10.62□□□□□ -0.71
RPL39P62891 AC084121.3-201ENST00000641716 218 ntBASIC10.62□□□□□ -0.71
RPL39P62891 AF228730.8-201ENST00000642140 221 ntBASIC10.62□□□□□ -0.71
RPL39P62891 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.62□□□□□ -0.71
RPL39P62891 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 AC090505.1-201ENST00000430515 1834 ntBASIC10.62□□□□□ -0.71
RPL39P62891 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 AL121723.1-201ENST00000445194 1519 ntBASIC10.62□□□□□ -0.71
RPL39P62891 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.62□□□□□ -0.71
RPL39P62891 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RPL39P62891 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.62□□□□□ -0.71
RPL39P62891 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms