Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZC3H6P61129 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZC3H6P61129 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZC3H6P61129 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.74
ZC3H6P61129 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H6P61129 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.64■□□□□ 0.73
ZC3H6P61129 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.64■□□□□ 0.73
ZC3H6P61129 AL139008.1-201ENST00000437894 228 ntBASIC19.64■□□□□ 0.73
ZC3H6P61129 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC19.64■□□□□ 0.73
ZC3H6P61129 RNA5SP417-201ENST00000516459 108 ntBASIC19.64■□□□□ 0.73
ZC3H6P61129 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.64■□□□□ 0.73
ZC3H6P61129 DNM1P51-201ENST00000558149 522 ntBASIC19.64■□□□□ 0.73
ZC3H6P61129 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.64■□□□□ 0.73
ZC3H6P61129 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.64■□□□□ 0.73
ZC3H6P61129 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H6P61129 KRT8P28-201ENST00000433288 1390 ntBASIC19.64■□□□□ 0.73
ZC3H6P61129 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.64■□□□□ 0.73
ZC3H6P61129 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H6P61129 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H6P61129 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.64■□□□□ 0.73
ZC3H6P61129 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H6P61129 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.64■□□□□ 0.73
ZC3H6P61129 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.64■□□□□ 0.73
ZC3H6P61129 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 C18orf15-201ENST00000623680 2534 ntBASIC19.64■□□□□ 0.73
ZC3H6P61129 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ZC3H6P61129 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZC3H6P61129 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC19.64■□□□□ 0.73
ZC3H6P61129 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZC3H6P61129 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZC3H6P61129 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.63■□□□□ 0.73
ZC3H6P61129 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.63■□□□□ 0.73
ZC3H6P61129 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.63■□□□□ 0.73
ZC3H6P61129 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.63■□□□□ 0.73
ZC3H6P61129 DPY19L2P5-201ENST00000456300 331 ntBASIC19.63■□□□□ 0.73
ZC3H6P61129 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.63■□□□□ 0.73
ZC3H6P61129 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ZC3H6P61129 HERC2P11-201ENST00000562845 725 ntBASIC19.63■□□□□ 0.73
ZC3H6P61129 AC100756.2-201ENST00000569537 736 ntBASIC19.63■□□□□ 0.73
ZC3H6P61129 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.63■□□□□ 0.73
ZC3H6P61129 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
ZC3H6P61129 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.63■□□□□ 0.73
ZC3H6P61129 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZC3H6P61129 AC112693.3-201ENST00000624819 1983 ntBASIC19.63■□□□□ 0.73
ZC3H6P61129 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC19.62■□□□□ 0.73
ZC3H6P61129 PCDHA1-201ENST00000378133 2726 ntBASIC19.62■□□□□ 0.73
ZC3H6P61129 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.62■□□□□ 0.73
ZC3H6P61129 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ZC3H6P61129 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ZC3H6P61129 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.62■□□□□ 0.73
ZC3H6P61129 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.62■□□□□ 0.73
ZC3H6P61129 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 AC138466.5-201ENST00000624002 808 ntBASIC19.62■□□□□ 0.73
ZC3H6P61129 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZC3H6P61129 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ZC3H6P61129 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H6P61129 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms