Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 AC083964.2-201ENST00000623988 2396 ntBASIC13.65□□□□□ -0.22
CXCR4P61073 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CXCR4P61073 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
CXCR4P61073 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 KRT18P43-201ENST00000469825 1281 ntBASIC13.65□□□□□ -0.22
CXCR4P61073 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.65□□□□□ -0.22
CXCR4P61073 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 MIR4469-201ENST00000583919 79 ntBASIC13.65□□□□□ -0.22
CXCR4P61073 MIR4453-201ENST00000584019 89 ntBASIC13.65□□□□□ -0.22
CXCR4P61073 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.65□□□□□ -0.22
CXCR4P61073 MIR6080-201ENST00000617359 66 ntBASIC13.65□□□□□ -0.22
CXCR4P61073 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCR4P61073 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CXCR4P61073 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCR4P61073 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.65□□□□□ -0.23
CXCR4P61073 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCR4P61073 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 AC215219.1-201ENST00000400706 1817 ntBASIC13.64□□□□□ -0.23
CXCR4P61073 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCR4P61073 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCR4P61073 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.64□□□□□ -0.23
CXCR4P61073 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCR4P61073 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.64□□□□□ -0.23
CXCR4P61073 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 AP000344.2-201ENST00000512987 629 ntBASIC13.64□□□□□ -0.23
CXCR4P61073 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.64□□□□□ -0.23
CXCR4P61073 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.64□□□□□ -0.23
CXCR4P61073 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCR4P61073 AL589739.1-201ENST00000607720 493 ntBASIC13.64□□□□□ -0.23
CXCR4P61073 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CXCR4P61073 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 BEND3P3-201ENST00000611030 2440 ntBASIC13.64□□□□□ -0.23
CXCR4P61073 MYADML-201ENST00000474610 2147 ntBASIC13.64□□□□□ -0.23
CXCR4P61073 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCR4P61073 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.64□□□□□ -0.23
CXCR4P61073 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CXCR4P61073 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CXCR4P61073 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
CXCR4P61073 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCR4P61073 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.63□□□□□ -0.23
CXCR4P61073 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CXCR4P61073 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CXCR4P61073 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CXCR4P61073 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms