Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.29□□□□□ -0.12
NR1H2P55055 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.29□□□□□ -0.12
NR1H2P55055 AC097493.3-201ENST00000509725 367 ntBASIC14.29□□□□□ -0.12
NR1H2P55055 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.29□□□□□ -0.12
NR1H2P55055 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 AC003101.2-201ENST00000612557 442 ntBASIC14.29□□□□□ -0.12
NR1H2P55055 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NR1H2P55055 AP3S2-216ENST00000617003 1561 ntBASIC14.29□□□□□ -0.12
NR1H2P55055 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.29□□□□□ -0.12
NR1H2P55055 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 AC019294.4-201ENST00000561777 2905 ntBASIC14.28□□□□□ -0.12
NR1H2P55055 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.28□□□□□ -0.12
NR1H2P55055 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
NR1H2P55055 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 RPL5P21-201ENST00000404620 815 ntBASIC14.28□□□□□ -0.12
NR1H2P55055 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 UGT1A2P-201ENST00000454886 866 ntBASIC14.28□□□□□ -0.12
NR1H2P55055 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.28□□□□□ -0.12
NR1H2P55055 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.28□□□□□ -0.12
NR1H2P55055 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NR1H2P55055 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.28□□□□□ -0.12
NR1H2P55055 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.28□□□□□ -0.12
NR1H2P55055 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.28□□□□□ -0.12
NR1H2P55055 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.28□□□□□ -0.12
NR1H2P55055 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
NR1H2P55055 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.28□□□□□ -0.12
NR1H2P55055 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.28□□□□□ -0.12
NR1H2P55055 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NR1H2P55055 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.28□□□□□ -0.12
NR1H2P55055 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NR1H2P55055 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NR1H2P55055 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR1H2P55055 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NR1H2P55055 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.27□□□□□ -0.12
NR1H2P55055 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NR1H2P55055 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR1H2P55055 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NR1H2P55055 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR1H2P55055 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR1H2P55055 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.27□□□□□ -0.12
NR1H2P55055 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NR1H2P55055 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NR1H2P55055 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 FAM220BP-201ENST00000377689 816 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms