Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.1■□□□□ 0.01
LIMK2P53671 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 AC120045.2-201ENST00000567334 178 ntBASIC15.1■□□□□ 0.01
LIMK2P53671 AL022328.1-201ENST00000610050 478 ntBASIC15.1■□□□□ 0.01
LIMK2P53671 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.1■□□□□ 0.01
LIMK2P53671 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 ANKRD19P-201ENST00000338192 862 ntBASIC15.09■□□□□ 0.01
LIMK2P53671 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 C1QBPP1-201ENST00000400117 770 ntBASIC15.09■□□□□ 0.01
LIMK2P53671 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.09■□□□□ 0.01
LIMK2P53671 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LIMK2P53671 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 PTP4A1P2-201ENST00000546033 454 ntBASIC15.09■□□□□ 0.01
LIMK2P53671 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.09■□□□□ 0.01
LIMK2P53671 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.09■□□□□ 0.01
LIMK2P53671 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.09■□□□□ 0.01
LIMK2P53671 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.09■□□□□ 0.01
LIMK2P53671 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 AC041040.2-201ENST00000622926 2899 ntBASIC15.09■□□□□ 0.01
LIMK2P53671 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.09■□□□□ 0.01
LIMK2P53671 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LIMK2P53671 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LIMK2P53671 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIMK2P53671 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIMK2P53671 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIMK2P53671 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
LIMK2P53671 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIMK2P53671 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIMK2P53671 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
LIMK2P53671 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LIMK2P53671 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIMK2P53671 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.08■□□□□ 0
LIMK2P53671 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.08■□□□□ 0
LIMK2P53671 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LIMK2P53671 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LIMK2P53671 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LIMK2P53671 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.08■□□□□ 0
LIMK2P53671 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.08■□□□□ 0
LIMK2P53671 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.08■□□□□ 0
LIMK2P53671 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.08■□□□□ 0
LIMK2P53671 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.08■□□□□ 0
LIMK2P53671 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LIMK2P53671 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.08■□□□□ 0
LIMK2P53671 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.08■□□□□ 0
LIMK2P53671 VDAC1P7-201ENST00000462417 847 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms