Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.99□□□□□ -0.17
RNF144AP50876 AC133539.2-201ENST00000604757 467 ntBASIC13.99□□□□□ -0.17
RNF144AP50876 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.99□□□□□ -0.17
RNF144AP50876 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.99□□□□□ -0.17
RNF144AP50876 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.99□□□□□ -0.17
RNF144AP50876 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.99□□□□□ -0.17
RNF144AP50876 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RNF144AP50876 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RNF144AP50876 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
RNF144AP50876 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RNF144AP50876 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RNF144AP50876 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF144AP50876 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF144AP50876 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
RNF144AP50876 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
RNF144AP50876 CRB3P1-201ENST00000449338 276 ntBASIC13.98□□□□□ -0.17
RNF144AP50876 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.98□□□□□ -0.17
RNF144AP50876 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
RNF144AP50876 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.98□□□□□ -0.17
RNF144AP50876 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 COA4-204ENST00000541455 1038 ntTSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC13.98□□□□□ -0.17
RNF144AP50876 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF144AP50876 AC093813.1-201ENST00000605066 256 ntBASIC13.98□□□□□ -0.17
RNF144AP50876 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RNF144AP50876 AL645728.2-202ENST00000641679 227 ntBASIC13.98□□□□□ -0.17
RNF144AP50876 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF144AP50876 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
RNF144AP50876 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF144AP50876 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RNF144AP50876 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF144AP50876 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 AL391825.1-201ENST00000457671 1364 ntBASIC13.97□□□□□ -0.17
RNF144AP50876 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 AC023090.2-201ENST00000625182 2110 ntBASIC13.97□□□□□ -0.17
RNF144AP50876 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RNF144AP50876 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 324.7 ms