Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 RPL5P21-201ENST00000404620 815 ntBASIC14.17□□□□□ -0.14
CLK1P49759 AC074338.1-201ENST00000416825 156 ntBASIC14.17□□□□□ -0.14
CLK1P49759 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.17□□□□□ -0.14
CLK1P49759 AC093214.1-201ENST00000511688 1107 ntBASIC14.17□□□□□ -0.14
CLK1P49759 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLK1P49759 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.17□□□□□ -0.14
CLK1P49759 AC009407.1-201ENST00000568958 598 ntBASIC14.17□□□□□ -0.14
CLK1P49759 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.17□□□□□ -0.14
CLK1P49759 AC027796.2-201ENST00000575326 344 ntBASIC14.17□□□□□ -0.14
CLK1P49759 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.17□□□□□ -0.14
CLK1P49759 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 AL390955.2-201ENST00000603032 514 ntBASIC14.17□□□□□ -0.14
CLK1P49759 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 AL359881.3-201ENST00000602640 1721 ntBASIC14.17□□□□□ -0.14
CLK1P49759 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLK1P49759 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLK1P49759 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.17□□□□□ -0.14
CLK1P49759 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 POM121L4P-202ENST00000427789 1891 ntBASIC14.16□□□□□ -0.14
CLK1P49759 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.16□□□□□ -0.14
CLK1P49759 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 AL133267.1-201ENST00000398220 340 ntBASIC14.16□□□□□ -0.14
CLK1P49759 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.16□□□□□ -0.14
CLK1P49759 AC005498.2-205ENST00000593218 784 ntBASIC14.16□□□□□ -0.14
CLK1P49759 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.16□□□□□ -0.14
CLK1P49759 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.16□□□□□ -0.14
CLK1P49759 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.16□□□□□ -0.14
CLK1P49759 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLK1P49759 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLK1P49759 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.16□□□□□ -0.14
CLK1P49759 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.16□□□□□ -0.14
CLK1P49759 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLK1P49759 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.15□□□□□ -0.14
CLK1P49759 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms