Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SART3-202ENST00000431469 2834 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC9.78□□□□□ -0.84
PCP4P48539 RSPH10B2-203ENST00000404077 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 RSPH10B-202ENST00000404406 3106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC9.78□□□□□ -0.84
PCP4P48539 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 CDK16-204ENST00000457458 3158 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC9.78□□□□□ -0.84
PCP4P48539 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC9.78□□□□□ -0.84
PCP4P48539 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
PCP4P48539 AL365181.1-201ENST00000564032 1828 ntBASIC9.78□□□□□ -0.84
PCP4P48539 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 PPP1R26P5-201ENST00000416640 3664 ntBASIC9.78□□□□□ -0.84
PCP4P48539 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
PCP4P48539 AC126177.7-201ENST00000547904 679 ntBASIC9.78□□□□□ -0.84
PCP4P48539 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 CDH8-211ENST00000584337 3986 ntTSL 5 BASIC9.78□□□□□ -0.84
PCP4P48539 ZNF18-205ENST00000580613 2250 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC9.78□□□□□ -0.84
PCP4P48539 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC9.78□□□□□ -0.84
PCP4P48539 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 TMEM255A-204ENST00000440464 3172 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
PCP4P48539 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
PCP4P48539 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 RASGRP4-201ENST00000293062 2926 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 CCDC18-201ENST00000343253 4867 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
PCP4P48539 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
PCP4P48539 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 ITIH4-212ENST00000485816 2990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
PCP4P48539 AP005058.1-201ENST00000580193 2975 ntBASIC9.78□□□□□ -0.84
PCP4P48539 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
PCP4P48539 GLOD4-201ENST00000301328 1809 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
PCP4P48539 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
PCP4P48539 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PCP4P48539 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC9.77□□□□□ -0.84
PCP4P48539 STK3-218ENST00000617590 2485 ntTSL 5 BASIC9.77□□□□□ -0.85
PCP4P48539 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 AC109347.1-201ENST00000562919 2036 ntBASIC9.77□□□□□ -0.85
PCP4P48539 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
PCP4P48539 CENPO-201ENST00000260662 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC9.77□□□□□ -0.85
PCP4P48539 PTPN6-201ENST00000318974 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 AL139348.1-201ENST00000569070 2208 ntBASIC9.77□□□□□ -0.85
PCP4P48539 COA5-202ENST00000409997 557 ntTSL 4 BASIC9.77□□□□□ -0.85
PCP4P48539 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 MIR6090-201ENST00000622481 60 ntBASIC9.77□□□□□ -0.85
PCP4P48539 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 ITGA10-201ENST00000369304 5269 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 HHAT-202ENST00000367009 2714 ntTSL 2 BASIC9.77□□□□□ -0.85
PCP4P48539 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 AC092611.1-201ENST00000514269 2565 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 FAM162A-203ENST00000477892 3052 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
PCP4P48539 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC9.77□□□□□ -0.85
PCP4P48539 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC9.77□□□□□ -0.85
PCP4P48539 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC9.77□□□□□ -0.85
PCP4P48539 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC9.77□□□□□ -0.85
PCP4P48539 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.77□□□□□ -0.85
PCP4P48539 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
PCP4P48539 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC9.77□□□□□ -0.85
PCP4P48539 AC026250.1-201ENST00000500698 2311 ntTSL 2 BASIC9.77□□□□□ -0.85
PCP4P48539 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PCP4P48539 RSPH10B-208ENST00000539903 2881 ntTSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms