Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 AL035633.1-201ENST00000406139 838 ntBASIC14.37□□□□□ -0.11
SLC6A12P48065 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC6A12P48065 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC6A12P48065 AC078819.1-201ENST00000547454 765 ntBASIC14.37□□□□□ -0.11
SLC6A12P48065 AC012085.1-201ENST00000548270 765 ntBASIC14.37□□□□□ -0.11
SLC6A12P48065 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC6A12P48065 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC6A12P48065 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 AC006453.4-201ENST00000636949 1252 ntBASIC14.37□□□□□ -0.11
SLC6A12P48065 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SLC6A12P48065 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC6A12P48065 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC6A12P48065 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC6A12P48065 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SLC6A12P48065 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 GRK6P1-201ENST00000400595 1711 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC6A12P48065 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SLC6A12P48065 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC6A12P48065 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SLC6A12P48065 AC004945.1-201ENST00000416738 983 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 ARSEP1-201ENST00000420443 635 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 FAM8A4P-201ENST00000435433 1213 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC6A12P48065 PUDPP3-201ENST00000445368 636 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC6A12P48065 AC007551.1-201ENST00000457394 519 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC6A12P48065 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC6A12P48065 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SLC6A12P48065 OR10B1P-201ENST00000601666 907 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 MIR6074-201ENST00000612054 107 ntBASIC14.36□□□□□ -0.11
SLC6A12P48065 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC6A12P48065 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC6A12P48065 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
SLC6A12P48065 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC6A12P48065 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC6A12P48065 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC6A12P48065 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC6A12P48065 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SLC6A12P48065 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.35□□□□□ -0.11
SLC6A12P48065 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 AC006001.1-201ENST00000325130 474 ntBASIC14.35□□□□□ -0.11
SLC6A12P48065 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC6A12P48065 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SLC6A12P48065 COX20P2-201ENST00000452636 358 ntBASIC14.35□□□□□ -0.11
SLC6A12P48065 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SLC6A12P48065 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC6A12P48065 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC6A12P48065 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC6A12P48065 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SLC6A12P48065 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms