Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PUDPP3-201ENST00000445368 636 ntBASIC16.46■□□□□ 0.23
RFC5P40937 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 AC007663.3-201ENST00000609632 465 ntBASIC16.46■□□□□ 0.23
RFC5P40937 AL023803.2-201ENST00000620080 638 ntBASIC16.46■□□□□ 0.23
RFC5P40937 Z99916.3-201ENST00000623422 1080 ntBASIC16.46■□□□□ 0.23
RFC5P40937 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.46■□□□□ 0.23
RFC5P40937 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RFC5P40937 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RFC5P40937 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.46■□□□□ 0.23
RFC5P40937 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC5P40937 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.46■□□□□ 0.22
RFC5P40937 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 FAM58BP-201ENST00000439056 645 ntBASIC16.45■□□□□ 0.22
RFC5P40937 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.45■□□□□ 0.22
RFC5P40937 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 AC126915.1-201ENST00000522847 1038 ntBASIC16.45■□□□□ 0.22
RFC5P40937 AP001258.2-201ENST00000529891 490 ntBASIC16.45■□□□□ 0.22
RFC5P40937 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.45■□□□□ 0.22
RFC5P40937 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.45■□□□□ 0.22
RFC5P40937 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 AL162426.1-201ENST00000624141 743 ntBASIC16.45■□□□□ 0.22
RFC5P40937 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RFC5P40937 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RFC5P40937 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC5P40937 AC018735.1-201ENST00000437208 1502 ntBASIC16.45■□□□□ 0.22
RFC5P40937 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 AJ011931.1-201ENST00000618749 2492 ntBASIC16.44■□□□□ 0.22
RFC5P40937 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RFC5P40937 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 KRT8P29-201ENST00000420409 1371 ntBASIC16.44■□□□□ 0.22
RFC5P40937 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC5P40937 MIR1247-201ENST00000408206 136 ntBASIC16.44■□□□□ 0.22
RFC5P40937 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.44■□□□□ 0.22
RFC5P40937 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 KRT8P13-201ENST00000463294 1010 ntBASIC16.44■□□□□ 0.22
RFC5P40937 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC5P40937 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.44■□□□□ 0.22
RFC5P40937 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.44■□□□□ 0.22
RFC5P40937 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.44■□□□□ 0.22
RFC5P40937 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.44■□□□□ 0.22
RFC5P40937 AC100827.2-201ENST00000563214 1194 ntBASIC16.44■□□□□ 0.22
RFC5P40937 AC005730.2-201ENST00000564549 1184 ntBASIC16.44■□□□□ 0.22
RFC5P40937 AC132192.2-201ENST00000596206 1147 ntBASIC16.44■□□□□ 0.22
RFC5P40937 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RFC5P40937 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms