Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT9P35527 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
KRT9P35527 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.41■□□□□ 0.22
KRT9P35527 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT9P35527 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT9P35527 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KRT9P35527 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT9P35527 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT9P35527 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT9P35527 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KRT9P35527 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT9P35527 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 AGGF1P1-201ENST00000509500 2073 ntBASIC16.41■□□□□ 0.22
KRT9P35527 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KRT9P35527 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT9P35527 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT9P35527 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT9P35527 TSPY16P-201ENST00000449843 468 ntBASIC16.4■□□□□ 0.22
KRT9P35527 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT9P35527 AC093004.1-201ENST00000508850 424 ntBASIC16.4■□□□□ 0.22
KRT9P35527 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 RRP7BP-205ENST00000566851 833 ntBASIC16.4■□□□□ 0.22
KRT9P35527 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
KRT9P35527 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT9P35527 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 AC011474.4-201ENST00000623523 2076 ntBASIC16.4■□□□□ 0.22
KRT9P35527 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT9P35527 MST1P2-201ENST00000457982 2291 ntBASIC16.4■□□□□ 0.22
KRT9P35527 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT9P35527 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 AC093525.8-201ENST00000624099 1342 ntBASIC16.4■□□□□ 0.22
KRT9P35527 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT9P35527 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT9P35527 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT9P35527 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT9P35527 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT9P35527 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KRT9P35527 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT9P35527 AL359881.3-201ENST00000602640 1721 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms