Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 AL137783.1-201ENST00000623494 1896 ntBASIC14.3□□□□□ -0.12
GPC1P35052 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 AC087499.6-201ENST00000411576 835 ntBASIC14.3□□□□□ -0.12
GPC1P35052 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.3□□□□□ -0.12
GPC1P35052 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.3□□□□□ -0.12
GPC1P35052 AP001582.1-201ENST00000525856 295 ntBASIC14.3□□□□□ -0.12
GPC1P35052 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.3□□□□□ -0.12
GPC1P35052 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.3□□□□□ -0.12
GPC1P35052 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 AC123567.1-201ENST00000548294 1261 ntBASIC14.3□□□□□ -0.12
GPC1P35052 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.3□□□□□ -0.12
GPC1P35052 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.3□□□□□ -0.12
GPC1P35052 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.3□□□□□ -0.12
GPC1P35052 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 AC018442.1-201ENST00000421439 2061 ntBASIC14.29□□□□□ -0.12
GPC1P35052 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 MTHFR-210ENST00000641407 2387 ntBASIC14.29□□□□□ -0.12
GPC1P35052 AC005840.4-201ENST00000541242 2494 ntBASIC14.29□□□□□ -0.12
GPC1P35052 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 SOCS2P1-201ENST00000417727 557 ntBASIC14.29□□□□□ -0.12
GPC1P35052 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC1P35052 SPTLC1P1-201ENST00000447199 261 ntBASIC14.29□□□□□ -0.12
GPC1P35052 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC1P35052 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC1P35052 MIR8072-201ENST00000614241 80 ntBASIC14.29□□□□□ -0.12
GPC1P35052 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 AL391825.1-201ENST00000457671 1364 ntBASIC14.29□□□□□ -0.12
GPC1P35052 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC1P35052 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC1P35052 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
GPC1P35052 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GPC1P35052 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC1P35052 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC1P35052 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms