Protein–RNA interactions for Protein: P33778

HIST1H2BB, Histone H2B type 1-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BBP33778 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HIST1H2BBP33778 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 AC215219.1-201ENST00000400706 1817 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 STRCP1-201ENST00000509801 5328 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 RNU1-129P-201ENST00000384064 167 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 AC004987.2-201ENST00000395959 1148 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 RPPH1-201ENST00000516869 333 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 U1.21-201ENST00000580816 167 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 AP000525.1-201ENST00000608286 694 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 FAM87A-204ENST00000613235 858 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 AC026471.5-201ENST00000615068 467 ntBASIC11.21□□□□□ -0.61
HIST1H2BBP33778 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.21□□□□□ -0.61
HIST1H2BBP33778 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 AL359510.2-201ENST00000624958 2249 ntBASIC11.21□□□□□ -0.62
HIST1H2BBP33778 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 LPP-AS2-201ENST00000605573 2852 ntBASIC11.21□□□□□ -0.62
HIST1H2BBP33778 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
HIST1H2BBP33778 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HIST1H2BBP33778 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
HIST1H2BBP33778 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
HIST1H2BBP33778 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.2□□□□□ -0.62
HIST1H2BBP33778 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
HIST1H2BBP33778 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
HIST1H2BBP33778 AC005014.1-201ENST00000432006 2976 ntBASIC11.2□□□□□ -0.62
HIST1H2BBP33778 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms