Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC6A4P31645 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 AC068418.2-201ENST00000577309 3703 ntBASIC15.28■□□□□ 0.04
SLC6A4P31645 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC6A4P31645 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A4P31645 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SLC6A4P31645 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC6A4P31645 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A4P31645 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A4P31645 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC6A4P31645 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC6A4P31645 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC6A4P31645 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC6A4P31645 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC6A4P31645 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 GPAA1P2-201ENST00000417923 928 ntBASIC15.27■□□□□ 0.04
SLC6A4P31645 KLF2P1-201ENST00000447438 1042 ntBASIC15.27■□□□□ 0.04
SLC6A4P31645 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 RNMTL1P1-201ENST00000454103 560 ntBASIC15.27■□□□□ 0.04
SLC6A4P31645 CICP12-201ENST00000455801 843 ntBASIC15.27■□□□□ 0.04
SLC6A4P31645 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A4P31645 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 AC132192.2-201ENST00000596206 1147 ntBASIC15.27■□□□□ 0.04
SLC6A4P31645 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC6A4P31645 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A4P31645 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC6A4P31645 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A4P31645 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC6A4P31645 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC6A4P31645 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SLC6A4P31645 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A4P31645 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC6A4P31645 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A4P31645 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC6A4P31645 CICP14-201ENST00000629111 2732 ntBASIC15.27■□□□□ 0.03
SLC6A4P31645 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A4P31645 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC6A4P31645 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A4P31645 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SLC6A4P31645 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
SLC6A4P31645 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A4P31645 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SLC6A4P31645 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A4P31645 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC6A4P31645 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 AL136172.1-201ENST00000598590 1394 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 AC244394.1-201ENST00000435000 1665 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 MRPL37P1-201ENST00000592451 1337 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC6A4P31645 AC004898.1-201ENST00000451057 766 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.26■□□□□ 0.03
SLC6A4P31645 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.26■□□□□ 0.03
SLC6A4P31645 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 AC008825.2-201ENST00000603374 718 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 AL451050.2-201ENST00000606967 682 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 AC022748.3-201ENST00000621828 275 ntBASIC15.26■□□□□ 0.03
SLC6A4P31645 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SLC6A4P31645 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC6A4P31645 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A4P31645 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms