Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CD40P25942 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.86□□□□□ -0.35
CD40P25942 SERPINA13P-202ENST00000478994 924 ntBASIC12.86□□□□□ -0.35
CD40P25942 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 ALG3P1-201ENST00000508806 1114 ntBASIC12.86□□□□□ -0.35
CD40P25942 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.86□□□□□ -0.35
CD40P25942 AC100827.2-201ENST00000563214 1194 ntBASIC12.86□□□□□ -0.35
CD40P25942 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.86□□□□□ -0.35
CD40P25942 DUX4L46-201ENST00000566845 751 ntBASIC12.86□□□□□ -0.35
CD40P25942 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.86□□□□□ -0.35
CD40P25942 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.86□□□□□ -0.35
CD40P25942 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
CD40P25942 AC009955.4-201ENST00000597192 544 ntBASIC12.86□□□□□ -0.35
CD40P25942 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 LINC00554-201ENST00000564841 3011 ntBASIC12.86□□□□□ -0.35
CD40P25942 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CD40P25942 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 AC006058.4-201ENST00000624016 1670 ntBASIC12.86□□□□□ -0.35
CD40P25942 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40P25942 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.86□□□□□ -0.35
CD40P25942 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CD40P25942 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40P25942 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 AC138028.6-201ENST00000616106 1482 ntBASIC12.85□□□□□ -0.35
CD40P25942 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.85□□□□□ -0.35
CD40P25942 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CD40P25942 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.85□□□□□ -0.35
CD40P25942 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.85□□□□□ -0.35
CD40P25942 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 TUBB8P8-201ENST00000458717 1058 ntBASIC12.85□□□□□ -0.35
CD40P25942 AKR7A2P1-201ENST00000460134 915 ntBASIC12.85□□□□□ -0.35
CD40P25942 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 SCARNA20.5-201ENST00000516991 142 ntBASIC12.85□□□□□ -0.35
CD40P25942 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.85□□□□□ -0.35
CD40P25942 AC131206.1-201ENST00000538078 1211 ntBASIC12.85□□□□□ -0.35
CD40P25942 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.85□□□□□ -0.35
CD40P25942 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.85□□□□□ -0.35
CD40P25942 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.85□□□□□ -0.35
CD40P25942 AL451050.2-201ENST00000606967 682 ntBASIC12.85□□□□□ -0.35
CD40P25942 BX088702.1-201ENST00000610784 235 ntBASIC12.85□□□□□ -0.35
CD40P25942 AL162426.1-201ENST00000624141 743 ntBASIC12.85□□□□□ -0.35
CD40P25942 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.85□□□□□ -0.35
CD40P25942 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD40P25942 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms