Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFKB1P19838 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NFKB1P19838 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NFKB1P19838 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFKB1P19838 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NFKB1P19838 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFKB1P19838 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFKB1P19838 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.22■□□□□ 0.03
NFKB1P19838 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
NFKB1P19838 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
NFKB1P19838 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFKB1P19838 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.21■□□□□ 0.03
NFKB1P19838 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.21■□□□□ 0.03
NFKB1P19838 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NFKB1P19838 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 AL138725.1-201ENST00000407347 1314 ntBASIC15.21■□□□□ 0.03
NFKB1P19838 CLUHP2-201ENST00000426660 1303 ntBASIC15.21■□□□□ 0.03
NFKB1P19838 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
NFKB1P19838 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
NFKB1P19838 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.21■□□□□ 0.03
NFKB1P19838 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NFKB1P19838 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NFKB1P19838 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 RN7SKP230-201ENST00000365642 335 ntBASIC15.21■□□□□ 0.03
NFKB1P19838 TTTY23B-201ENST00000442790 549 ntBASIC15.21■□□□□ 0.03
NFKB1P19838 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.21■□□□□ 0.03
NFKB1P19838 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.21■□□□□ 0.03
NFKB1P19838 AC008735.3-201ENST00000596646 500 ntBASIC15.21■□□□□ 0.03
NFKB1P19838 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.21■□□□□ 0.03
NFKB1P19838 IGHV3-72-202ENST00000621503 303 ntBASIC15.21■□□□□ 0.03
NFKB1P19838 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NFKB1P19838 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.21■□□□□ 0.03
NFKB1P19838 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NFKB1P19838 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.21■□□□□ 0.03
NFKB1P19838 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.21■□□□□ 0.03
NFKB1P19838 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NFKB1P19838 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NFKB1P19838 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.21■□□□□ 0.02
NFKB1P19838 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NFKB1P19838 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NFKB1P19838 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NFKB1P19838 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
NFKB1P19838 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.21■□□□□ 0.02
NFKB1P19838 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.21■□□□□ 0.02
NFKB1P19838 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NFKB1P19838 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NFKB1P19838 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.2■□□□□ 0.02
NFKB1P19838 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NFKB1P19838 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 AL512384.1-201ENST00000406683 331 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.2■□□□□ 0.02
NFKB1P19838 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.2■□□□□ 0.02
NFKB1P19838 BCRP2-202ENST00000447763 634 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 TPT1P11-201ENST00000458482 498 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.2■□□□□ 0.02
NFKB1P19838 BCRP6-201ENST00000510112 632 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 BCRP7-201ENST00000511549 544 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NFKB1P19838 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.2■□□□□ 0.02
NFKB1P19838 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NFKB1P19838 SLC25A47P1-201ENST00000531577 414 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.2■□□□□ 0.02
NFKB1P19838 RN7SL48P-201ENST00000579283 293 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 AC015936.2-201ENST00000593177 259 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 AC011840.2-201ENST00000563063 1520 ntBASIC15.2■□□□□ 0.02
NFKB1P19838 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
NFKB1P19838 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NFKB1P19838 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFKB1P19838 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms