Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CLTAP09496 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.4■□□□□ 0.22
CLTAP09496 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.4■□□□□ 0.22
CLTAP09496 YBX1P6-201ENST00000442962 1002 ntBASIC16.4■□□□□ 0.22
CLTAP09496 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.4■□□□□ 0.22
CLTAP09496 MESTP3-201ENST00000503460 968 ntBASIC16.4■□□□□ 0.22
CLTAP09496 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.4■□□□□ 0.22
CLTAP09496 RNA5SP412-201ENST00000516234 123 ntBASIC16.4■□□□□ 0.22
CLTAP09496 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.4■□□□□ 0.22
CLTAP09496 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.4■□□□□ 0.22
CLTAP09496 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLTAP09496 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.4■□□□□ 0.22
CLTAP09496 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.4■□□□□ 0.22
CLTAP09496 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.4■□□□□ 0.22
CLTAP09496 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.4■□□□□ 0.22
CLTAP09496 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLTAP09496 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.4■□□□□ 0.22
CLTAP09496 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CLTAP09496 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLTAP09496 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLTAP09496 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLTAP09496 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLTAP09496 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLTAP09496 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CLTAP09496 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLTAP09496 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLTAP09496 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CLTAP09496 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.39■□□□□ 0.21
CLTAP09496 FAM21FP-201ENST00000426241 1131 ntBASIC16.39■□□□□ 0.21
CLTAP09496 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 FAM8A4P-201ENST00000435433 1213 ntBASIC16.39■□□□□ 0.21
CLTAP09496 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.39■□□□□ 0.21
CLTAP09496 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.39■□□□□ 0.21
CLTAP09496 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 AC138466.3-201ENST00000619983 221 ntBASIC16.39■□□□□ 0.21
CLTAP09496 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 CLUHP2-201ENST00000426660 1303 ntBASIC16.39■□□□□ 0.21
CLTAP09496 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 AL354989.2-201ENST00000435838 1540 ntBASIC16.39■□□□□ 0.21
CLTAP09496 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.39■□□□□ 0.21
CLTAP09496 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLTAP09496 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLTAP09496 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms