Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.03■□□□□ -0
APOA4P06727 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.03■□□□□ -0
APOA4P06727 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.03■□□□□ -0
APOA4P06727 AL033527.5-201ENST00000641382 801 ntBASIC15.03■□□□□ -0
APOA4P06727 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
APOA4P06727 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 AL359881.3-201ENST00000602640 1721 ntBASIC15.03■□□□□ -0
APOA4P06727 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APOA4P06727 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.03■□□□□ -0
APOA4P06727 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
APOA4P06727 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.02■□□□□ -0
APOA4P06727 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
APOA4P06727 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
APOA4P06727 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
APOA4P06727 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.02■□□□□ -0
APOA4P06727 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.02■□□□□ -0
APOA4P06727 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.02■□□□□ -0
APOA4P06727 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.02■□□□□ -0
APOA4P06727 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
APOA4P06727 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
APOA4P06727 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 AC098614.1-201ENST00000368528 745 ntBASIC15.02■□□□□ -0
APOA4P06727 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.02■□□□□ -0
APOA4P06727 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
APOA4P06727 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOA4P06727 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.02■□□□□ -0
APOA4P06727 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.02■□□□□ -0
APOA4P06727 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.02■□□□□ -0
APOA4P06727 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.02■□□□□ -0
APOA4P06727 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.02■□□□□ -0
APOA4P06727 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
APOA4P06727 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOA4P06727 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOA4P06727 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
APOA4P06727 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOA4P06727 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
APOA4P06727 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOA4P06727 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOA4P06727 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.01□□□□□ -0.01
APOA4P06727 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
APOA4P06727 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.01□□□□□ -0.01
APOA4P06727 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
APOA4P06727 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.01□□□□□ -0.01
APOA4P06727 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
APOA4P06727 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
APOA4P06727 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
APOA4P06727 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
APOA4P06727 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
APOA4P06727 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.01□□□□□ -0.01
APOA4P06727 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOA4P06727 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
APOA4P06727 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
APOA4P06727 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOA4P06727 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.01□□□□□ -0.01
APOA4P06727 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.01□□□□□ -0.01
APOA4P06727 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.01□□□□□ -0.01
APOA4P06727 AC011495.1-201ENST00000498085 584 ntBASIC15.01□□□□□ -0.01
APOA4P06727 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.01□□□□□ -0.01
APOA4P06727 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.01□□□□□ -0.01
APOA4P06727 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
APOA4P06727 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOA4P06727 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.01□□□□□ -0.01
APOA4P06727 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.01□□□□□ -0.01
APOA4P06727 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms