Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT6AP02538 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT6AP02538 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.56□□□□□ -0.08
KRT6AP02538 AL603764.1-201ENST00000636452 321 ntBASIC14.56□□□□□ -0.08
KRT6AP02538 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT6AP02538 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
KRT6AP02538 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT6AP02538 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
KRT6AP02538 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT6AP02538 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT6AP02538 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
KRT6AP02538 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT6AP02538 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT6AP02538 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
KRT6AP02538 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT6AP02538 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
KRT6AP02538 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT6AP02538 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT6AP02538 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT6AP02538 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT6AP02538 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
KRT6AP02538 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 DFFBP1-201ENST00000433250 979 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT6AP02538 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
KRT6AP02538 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.55□□□□□ -0.08
KRT6AP02538 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.55□□□□□ -0.08
KRT6AP02538 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT6AP02538 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 DUX4L47-201ENST00000566374 394 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 SPDYE22P-201ENST00000582158 798 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 GPALPP1-207ENST00000611650 899 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT6AP02538 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT6AP02538 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 KRT8P22-201ENST00000562317 1415 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 AC015802.1-201ENST00000588104 1449 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 AC097359.2-201ENST00000604992 2389 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT6AP02538 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
KRT6AP02538 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
KRT6AP02538 AC055811.4-201ENST00000624039 1754 ntBASIC14.55□□□□□ -0.08
KRT6AP02538 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6AP02538 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT6AP02538 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6AP02538 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT6AP02538 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KRT6AP02538 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6AP02538 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KRT6AP02538 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6AP02538 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6AP02538 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6AP02538 PMS2P2-201ENST00000425039 1128 ntBASIC14.54□□□□□ -0.08
KRT6AP02538 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT6AP02538 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6AP02538 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6AP02538 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6AP02538 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms