Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.75□□□□□ -0.53
ZNF253O75346 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ZNF253O75346 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ZNF253O75346 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 AC011474.4-201ENST00000623523 2076 ntBASIC11.74□□□□□ -0.53
ZNF253O75346 AP000845.1-201ENST00000581677 2131 ntBASIC11.74□□□□□ -0.53
ZNF253O75346 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 AL627223.1-201ENST00000416693 442 ntBASIC11.74□□□□□ -0.53
ZNF253O75346 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.74□□□□□ -0.53
ZNF253O75346 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.74□□□□□ -0.53
ZNF253O75346 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.74□□□□□ -0.53
ZNF253O75346 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
ZNF253O75346 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.74□□□□□ -0.53
ZNF253O75346 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.74□□□□□ -0.53
ZNF253O75346 AC003101.2-201ENST00000612557 442 ntBASIC11.74□□□□□ -0.53
ZNF253O75346 AL513210.1-201ENST00000629608 234 ntBASIC11.74□□□□□ -0.53
ZNF253O75346 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ZNF253O75346 MST1P2-201ENST00000457982 2291 ntBASIC11.74□□□□□ -0.53
ZNF253O75346 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ZNF253O75346 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ZNF253O75346 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ZNF253O75346 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
ZNF253O75346 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
ZNF253O75346 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ZNF253O75346 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.73□□□□□ -0.53
ZNF253O75346 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.73□□□□□ -0.53
ZNF253O75346 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
ZNF253O75346 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.73□□□□□ -0.53
ZNF253O75346 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ZNF253O75346 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.73□□□□□ -0.53
ZNF253O75346 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.73□□□□□ -0.53
ZNF253O75346 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ZNF253O75346 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.73□□□□□ -0.53
ZNF253O75346 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.73□□□□□ -0.53
ZNF253O75346 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms