Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNND1O60716 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CTNND1O60716 AC104640.1-201ENST00000562617 2109 ntBASIC17.35■□□□□ 0.37
CTNND1O60716 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.35■□□□□ 0.37
CTNND1O60716 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CTNND1O60716 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTNND1O60716 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.35■□□□□ 0.37
CTNND1O60716 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.35■□□□□ 0.37
CTNND1O60716 NOC2LP1-201ENST00000450578 752 ntBASIC17.35■□□□□ 0.37
CTNND1O60716 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 IQSEC3P1-201ENST00000538799 536 ntBASIC17.35■□□□□ 0.37
CTNND1O60716 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.35■□□□□ 0.37
CTNND1O60716 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.35■□□□□ 0.37
CTNND1O60716 AC073352.2-201ENST00000609385 439 ntBASIC17.35■□□□□ 0.37
CTNND1O60716 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.35■□□□□ 0.37
CTNND1O60716 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.35■□□□□ 0.37
CTNND1O60716 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CTNND1O60716 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.35■□□□□ 0.37
CTNND1O60716 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CTNND1O60716 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.35■□□□□ 0.37
CTNND1O60716 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNND1O60716 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNND1O60716 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTNND1O60716 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.34■□□□□ 0.37
CTNND1O60716 FGFR3P1-201ENST00000449999 601 ntBASIC17.34■□□□□ 0.37
CTNND1O60716 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.34■□□□□ 0.37
CTNND1O60716 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.34■□□□□ 0.37
CTNND1O60716 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.34■□□□□ 0.37
CTNND1O60716 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.34■□□□□ 0.37
CTNND1O60716 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.34■□□□□ 0.37
CTNND1O60716 AC092384.3-202ENST00000564646 2873 ntBASIC17.34■□□□□ 0.37
CTNND1O60716 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 AC026803.1-201ENST00000569130 274 ntBASIC17.34■□□□□ 0.37
CTNND1O60716 CYP4F23P-201ENST00000593402 1579 ntBASIC17.34■□□□□ 0.37
CTNND1O60716 AC007292.2-201ENST00000593524 1812 ntBASIC17.34■□□□□ 0.37
CTNND1O60716 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.34■□□□□ 0.37
CTNND1O60716 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.34■□□□□ 0.37
CTNND1O60716 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNND1O60716 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTNND1O60716 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTNND1O60716 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.34■□□□□ 0.37
CTNND1O60716 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms