Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.08□□□□□ -0.16
LRRTM2O43300 AC012441.1-201ENST00000446669 685 ntBASIC14.08□□□□□ -0.16
LRRTM2O43300 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRTM2O43300 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.08□□□□□ -0.16
LRRTM2O43300 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRTM2O43300 AC243562.2-201ENST00000561247 970 ntBASIC14.08□□□□□ -0.16
LRRTM2O43300 C2orf69P2-201ENST00000562032 1123 ntBASIC14.08□□□□□ -0.16
LRRTM2O43300 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRTM2O43300 AC120045.2-201ENST00000567334 178 ntBASIC14.08□□□□□ -0.16
LRRTM2O43300 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.08□□□□□ -0.16
LRRTM2O43300 CLUHP6-201ENST00000580789 941 ntBASIC14.08□□□□□ -0.16
LRRTM2O43300 AL049840.4-201ENST00000602422 811 ntBASIC14.08□□□□□ -0.16
LRRTM2O43300 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRTM2O43300 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRTM2O43300 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRTM2O43300 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LRRTM2O43300 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRTM2O43300 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRTM2O43300 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRTM2O43300 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LRRTM2O43300 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRTM2O43300 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRTM2O43300 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRRTM2O43300 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRTM2O43300 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRTM2O43300 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRTM2O43300 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 MSTO2P-201ENST00000314835 1709 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
LRRTM2O43300 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM2O43300 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LRRTM2O43300 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM2O43300 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 C2orf27AP3-201ENST00000434123 579 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 AC006033.1-201ENST00000440505 426 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 VDAC1P7-201ENST00000462417 847 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM2O43300 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM2O43300 AC106760.1-201ENST00000508690 800 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 ZNF767P-206ENST00000513792 565 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.07□□□□□ -0.16
LRRTM2O43300 AP001258.2-201ENST00000529891 490 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 RHOQP1-201ENST00000555758 579 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM2O43300 AP001063.1-201ENST00000568332 529 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM2O43300 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM2O43300 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM2O43300 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRTM2O43300 AL354718.3-201ENST00000616414 581 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 CR382287.1-201ENST00000623954 586 ntBASIC14.07□□□□□ -0.16
LRRTM2O43300 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRTM2O43300 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRTM2O43300 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRRTM2O43300 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRTM2O43300 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRTM2O43300 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM2O43300 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM2O43300 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM2O43300 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM2O43300 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM2O43300 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRTM2O43300 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms