Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS4O43181 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS4O43181 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NDUFS4O43181 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS4O43181 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NDUFS4O43181 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
NDUFS4O43181 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS4O43181 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFS4O43181 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFS4O43181 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS4O43181 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NDUFS4O43181 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS4O43181 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.33□□□□□ -0.11
NDUFS4O43181 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.33□□□□□ -0.11
NDUFS4O43181 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFS4O43181 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFS4O43181 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NDUFS4O43181 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 SALL4P5-201ENST00000419001 1760 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 AL354989.2-201ENST00000435838 1540 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NDUFS4O43181 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.33□□□□□ -0.12
NDUFS4O43181 AC079776.1-201ENST00000401540 1152 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 CNN2P8-201ENST00000421872 913 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 KLF2P4-201ENST00000451959 1225 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 CTBP2P5-201ENST00000454986 1264 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 ACA64.2-201ENST00000459014 129 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFS4O43181 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFS4O43181 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.33□□□□□ -0.12
NDUFS4O43181 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFS4O43181 AC078819.1-201ENST00000547454 765 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 AC012085.1-201ENST00000548270 765 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.33□□□□□ -0.12
NDUFS4O43181 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFS4O43181 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFS4O43181 AC138466.3-201ENST00000619983 221 ntBASIC14.33□□□□□ -0.12
NDUFS4O43181 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFS4O43181 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFS4O43181 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFS4O43181 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NDUFS4O43181 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NDUFS4O43181 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFS4O43181 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NDUFS4O43181 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
NDUFS4O43181 ARSEP1-201ENST00000420443 635 ntBASIC14.32□□□□□ -0.12
NDUFS4O43181 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
NDUFS4O43181 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 FTLP10-202ENST00000505798 471 ntBASIC14.32□□□□□ -0.12
NDUFS4O43181 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.32□□□□□ -0.12
NDUFS4O43181 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.32□□□□□ -0.12
NDUFS4O43181 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFS4O43181 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFS4O43181 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms