Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 AL356585.2-201ENST00000625078 2396 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.29□□□□□ -0.76
NDUFA1O15239 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.29□□□□□ -0.76
NDUFA1O15239 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
NDUFA1O15239 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 AC104457.1-201ENST00000401024 814 ntBASIC10.29□□□□□ -0.76
NDUFA1O15239 SPDYE17-201ENST00000412399 783 ntBASIC10.29□□□□□ -0.76
NDUFA1O15239 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.29□□□□□ -0.76
NDUFA1O15239 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 PGAM5P1-201ENST00000518923 814 ntBASIC10.29□□□□□ -0.76
NDUFA1O15239 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.29□□□□□ -0.76
NDUFA1O15239 AC004835.2-201ENST00000603762 682 ntBASIC10.29□□□□□ -0.76
NDUFA1O15239 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.29□□□□□ -0.76
NDUFA1O15239 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.29□□□□□ -0.76
NDUFA1O15239 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
NDUFA1O15239 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 INE2-201ENST00000630399 1874 ntBASIC10.29□□□□□ -0.76
NDUFA1O15239 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.29□□□□□ -0.76
NDUFA1O15239 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.29□□□□□ -0.76
NDUFA1O15239 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NDUFA1O15239 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 TCAM1P-207ENST00000485295 1537 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 LILRP1-201ENST00000444199 1370 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 KRT8P12-202ENST00000472924 1397 ntBASIC10.28□□□□□ -0.76
NDUFA1O15239 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NDUFA1O15239 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
NDUFA1O15239 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
NDUFA1O15239 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.28□□□□□ -0.76
NDUFA1O15239 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms