Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.61■□□□□ 0.73
APAF1O14727 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.61■□□□□ 0.73
APAF1O14727 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.61■□□□□ 0.73
APAF1O14727 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 AP005482.1-201ENST00000563722 1273 ntBASIC19.61■□□□□ 0.73
APAF1O14727 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.61■□□□□ 0.73
APAF1O14727 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
APAF1O14727 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.61■□□□□ 0.73
APAF1O14727 AP001002.3-201ENST00000623482 206 ntBASIC19.61■□□□□ 0.73
APAF1O14727 AC002472.3-201ENST00000640124 621 ntBASIC19.61■□□□□ 0.73
APAF1O14727 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
APAF1O14727 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
APAF1O14727 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
APAF1O14727 AC067930.6-201ENST00000623257 4947 ntBASIC19.61■□□□□ 0.73
APAF1O14727 AGGF1P1-201ENST00000509500 2073 ntBASIC19.61■□□□□ 0.73
APAF1O14727 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
APAF1O14727 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
APAF1O14727 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.61■□□□□ 0.73
APAF1O14727 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APAF1O14727 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
APAF1O14727 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.6■□□□□ 0.73
APAF1O14727 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC19.6■□□□□ 0.73
APAF1O14727 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
APAF1O14727 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.6■□□□□ 0.73
APAF1O14727 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.6■□□□□ 0.73
APAF1O14727 KRT223P-202ENST00000449164 1292 ntBASIC19.6■□□□□ 0.73
APAF1O14727 BNIP3P42-201ENST00000454982 569 ntBASIC19.6■□□□□ 0.73
APAF1O14727 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.6■□□□□ 0.73
APAF1O14727 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.6■□□□□ 0.73
APAF1O14727 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.6■□□□□ 0.73
APAF1O14727 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.6■□□□□ 0.73
APAF1O14727 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.6■□□□□ 0.73
APAF1O14727 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.6■□□□□ 0.73
APAF1O14727 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.6■□□□□ 0.73
APAF1O14727 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.6■□□□□ 0.73
APAF1O14727 BNIP3P29-201ENST00000598302 571 ntBASIC19.6■□□□□ 0.73
APAF1O14727 AC133552.6-201ENST00000613406 534 ntBASIC19.6■□□□□ 0.73
APAF1O14727 MIR6805-201ENST00000615055 62 ntBASIC19.6■□□□□ 0.73
APAF1O14727 AC011447.5-201ENST00000616168 564 ntBASIC19.6■□□□□ 0.73
APAF1O14727 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
APAF1O14727 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
APAF1O14727 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC19.6■□□□□ 0.73
APAF1O14727 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
APAF1O14727 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
APAF1O14727 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.59■□□□□ 0.73
APAF1O14727 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.59■□□□□ 0.73
APAF1O14727 FAM45BP-202ENST00000592932 1624 ntBASIC19.59■□□□□ 0.73
APAF1O14727 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.59■□□□□ 0.73
APAF1O14727 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
APAF1O14727 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.59■□□□□ 0.73
APAF1O14727 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.59■□□□□ 0.73
APAF1O14727 AC079316.1-201ENST00000548397 411 ntBASIC19.59■□□□□ 0.73
APAF1O14727 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
APAF1O14727 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.59■□□□□ 0.73
APAF1O14727 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
APAF1O14727 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
APAF1O14727 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
APAF1O14727 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC19.59■□□□□ 0.73
APAF1O14727 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms