Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AC092666.2-201ENST00000613287 246 ntBASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PELO-201ENST00000274311 4349 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 ACE3P-201ENST00000423435 1973 ntBASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 CACNB4-246ENST00000637309 7409 ntTSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHKB-CPT1BH3BT56 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TOP3BP1-201ENST00000420768 1380 ntBASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 HSPA2-202ENST00000394709 5400 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ZDHHC15-203ENST00000541184 6012 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 MYH16-203ENST00000439784 5836 ntBASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 HIST1H2APS4-201ENST00000362070 348 ntBASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM220CP-201ENST00000395253 831 ntBASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 METTL15-202ENST00000403099 795 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 RPS15-207ENST00000591032 550 ntTSL 3 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 RPS15-212ENST00000593052 629 ntTSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CHKB-CPT1BH3BT56 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms