Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AC006058.4-201ENST00000624016 1670 ntBASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AC055811.4-201ENST00000624039 1754 ntBASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 AGAP7P-201ENST00000582299 2062 ntBASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 AGAP14-201ENST00000624701 2060 ntBASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 RPSAP36-202ENST00000494591 1261 ntBASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 COX5BP1-201ENST00000507622 393 ntBASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 AP001258.2-201ENST00000529891 490 ntBASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 AC104982.3-201ENST00000581995 514 ntBASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NPIPA3F8WFD2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.65□□□□□ -0.23
NPIPA3F8WFD2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
NPIPA3F8WFD2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 ZBED1P1-201ENST00000502364 1930 ntBASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AP000845.1-201ENST00000581677 2131 ntBASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AL591846.1-201ENST00000451736 433 ntBASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 KRT8P13-201ENST00000463294 1010 ntBASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA3F8WFD2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms