Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 OR2K2-202ENST00000374428 1038 ntBASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 ST13P19-201ENST00000442505 1124 ntBASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 FTLP1-201ENST00000449155 526 ntBASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 MIR3677-201ENST00000578964 60 ntBASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 AC015688.4-201ENST00000580780 1647 ntBASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC144AA2RUR9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 RN7SL67P-201ENST00000492147 296 ntBASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 IGLV3-15-201ENST00000518356 244 ntBASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 AC018529.2-202ENST00000611482 3087 ntBASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 AC104640.1-201ENST00000562617 2109 ntBASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC144AA2RUR9 AC015909.3-201ENST00000572855 1794 ntBASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 IGF1-203ENST00000392904 761 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 PHBP15-201ENST00000574228 665 ntBASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC144AA2RUR9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC144AA2RUR9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms